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1.
Braz. j. microbiol ; 48(3): 395-396, July-Sept. 2017.
Article in English | LILACS | ID: biblio-889155

ABSTRACT

Abstract Pediococcus acidilactici strain S1, a lactic acid-fermenting bacterium, was isolated from makgeolli-a Korean traditional fermented alcoholic beverage. Here we report the 1,980,172 bp (G + C content, 42%) genome sequence of Pediococcus acidilactici strain S1 with 1,525 protein-coding sequences (CDS), of which 47% could be assigned to recognized functional genes. The genome sequence of the strain S1 might provide insights into the genetic basis of the lactic acid bacterium with alcohol-tolerant.


Subject(s)
Genome, Bacterial , Lactic Acid/metabolism , Alcoholic Beverages/microbiology , Pediococcus acidilactici/isolation & purification , Pediococcus acidilactici/genetics , Base Sequence , Republic of Korea , Fermentation , Pediococcus acidilactici/metabolism , Whole Genome Sequencing
2.
Braz. j. microbiol ; 48(2): 187-188, April.-June 2017.
Article in English | LILACS | ID: biblio-839392

ABSTRACT

Abstract Pseudomonas taiwanensis strain SJ9 is a caprolactam degrader, isolated from industrial wastewater in South Korea and considered to have the potential for caprolactam bioremediation. The genome of this strain is approximately 6.2 Mb (G + C content, 61.75%) with 6,010 protein-coding sequences (CDS), of which 46% are assigned to recognized functional genes. This draft genome of strain SJ9 will provide insights into the genetic basis of its caprolactam-degradation ability.


Subject(s)
Pseudomonas/genetics , Pseudomonas/metabolism , DNA, Bacterial/genetics , DNA, Bacterial/chemistry , Caprolactam/metabolism , Genome, Bacterial , Sequence Analysis, DNA , Pseudomonas/isolation & purification , Base Composition , Water Microbiology , Biotransformation , Open Reading Frames , Molecular Sequence Annotation , Industrial Waste , Korea
3.
Braz. j. microbiol ; 48(1): 3-4, Jan.-Mar. 2017.
Article in English | LILACS | ID: biblio-839346

ABSTRACT

Abstract Thermococcus thioreducens DSM 14981T, a sulfur-reducing archaeon, was isolated from the rainbow hydrothermal vent site on the Mid-Atlantic Ridge. Herein, we report the draft genome sequence of T. thioreducens DSM 14981T; we obtained 41 contigs with a genome size of 2,052,483 bp and G + C content of 53.5%. This genome sequence will not only help understand how the archaeon adapts to the deep-sea hydrothermal environment but also aid the development of enzymes that are highly stable under extreme conditions for industrial applications.


Subject(s)
Sulfur/metabolism , Thermococcus/genetics , Thermococcus/metabolism , Genome, Archaeal , Genomics , High-Throughput Nucleotide Sequencing , Sequence Analysis, DNA , Computational Biology/methods , Genomics/methods , Molecular Sequence Annotation
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